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EEF1A1P3 eukaryotic translation elongation factor 1 alpha 1 pseudogene 3 [ Homo sapiens (human) ]

Gene ID: 100421865, updated on 10-Oct-2023

Summary

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Official Symbol
EEF1A1P3provided by HGNC
Official Full Name
eukaryotic translation elongation factor 1 alpha 1 pseudogene 3provided by HGNC
Primary source
HGNC:HGNC:3194
See related
Ensembl:ENSG00000232587 AllianceGenome:HGNC:3194
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
EEF1AL; EEF1AL1
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Genomic context

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Location:
13q12.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (28214455..28216077)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (27436999..27438621)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (28788592..28790214)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 8 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5208 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5209 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5210 Neighboring gene Sharpr-MPRA regulatory region 11800 Neighboring gene Sharpr-MPRA regulatory region 9463 Neighboring gene PAN3 antisense RNA 1 Neighboring gene poly(A) specific ribonuclease subunit PAN3 Neighboring gene NANOG hESC enhancer GRCh37_chr13:28812056-28812711 Neighboring gene RNA, U6 small nuclear 82, pseudogene Neighboring gene uncharacterized LOC124903140

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Selection of cDNAs using chromosome-specific genomic clones: application to human chromosome 13. Bonaldo MF, et al. Hum Mol Genet, 1994 Sep. PMID 7833926
  2. Assignment of human elongation factor 1alpha genes: EEF1A maps to chromosome 6q14 and EEF1A2 to 20q13.3. Lund A, et al. Genomics, 1996 Sep 1. PMID 8812466
  3. RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination. Choudhury NR, et al. BMC Biol, 2017 Nov 8. PMID 29117863, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Other Names

  • EEF1A1 (Eukaryotic translation elongation factor 1 alpha 1) pseudogene
  • eukaryotic translation elongation factor 1 alpha 2 pseudogene
  • eukaryotic translation elongation factor 1 alpha-like 1 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_024908.2 

    Range
    101..1723
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    28214455..28216077
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    27436999..27438621
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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