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BNIP3P40 BCL2 interacting protein 3 pseudogene 40 [ Homo sapiens (human) ]

Gene ID: 100421702, updated on 10-Oct-2023

Summary

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Official Symbol
BNIP3P40provided by HGNC
Official Full Name
BCL2 interacting protein 3 pseudogene 40provided by HGNC
Primary source
HGNC:HGNC:49720
See related
Ensembl:ENSG00000268058 AllianceGenome:HGNC:49720
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See BNIP3P40 in Genome Data Viewer
Location:
19p12
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 19 NC_000019.10 (24098427..24098980, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 19 NC_060943.1 (24248614..24249167, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (24281229..24281782, complement)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene RNA, 28S ribosomal pseudogene Neighboring gene Sharpr-MPRA regulatory regions 11764 and 11751 Neighboring gene Sharpr-MPRA regulatory region 3900 Neighboring gene RNA, 5.8S ribosomal pseudogene 4 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14396 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14397 Neighboring gene zinc finger protein 254 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14398 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14399 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14400 Neighboring gene long intergenic non-protein coding RNA 3085 Neighboring gene hepatitis A virus cellular receptor 1 pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

Other Names

  • BCL2/adenovirus E1B 19kDa interacting protein 3 pseudogene 40

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_024173.1 

    Range
    101..654
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p14 Primary Assembly

    Range
    24098427..24098980 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060943.1 Alternate T2T-CHM13v2.0

    Range
    24248614..24249167 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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