U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PGBD4P4 piggyBac transposable element derived 4 pseudogene 4 [ Homo sapiens (human) ]

Gene ID: 100421146, updated on 10-Oct-2023

Summary

Go to the top of the page Help
Official Symbol
PGBD4P4provided by HGNC
Official Full Name
piggyBac transposable element derived 4 pseudogene 4provided by HGNC
Primary source
HGNC:HGNC:44076
See related
Ensembl:ENSG00000248877 AllianceGenome:HGNC:44076
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
4q28.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (130494673..130495279)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (133799013..133799619)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (131415828..131416434)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105377418 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:130946914-130947462 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:130947463-130948009 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:130950447-130951146 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr4:130972816-130974015 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_74389 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_74415 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_74418 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_74428 Neighboring gene long intergenic non-protein coding RNA 2479 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_74530 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_74536 Neighboring gene Sharpr-MPRA regulatory region 6093 Neighboring gene glyceraldehyde 3 phosphate dehydrogenase pseudogene 56 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr4:131553588-131554787 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:131567488-131567988 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr4:131688324-131689108 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:131934342-131934873 Neighboring gene uncharacterized LOC105377422

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

Go to the top of the page Help

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_025253.1 

    Range
    101..707
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    130494673..130495279
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    133799013..133799619
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases