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GMCL1P2 GMCL1 pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 100420975, updated on 10-Oct-2023

Summary

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Official Symbol
GMCL1P2provided by HGNC
Official Full Name
GMCL1 pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:42863
See related
Ensembl:ENSG00000271070 AllianceGenome:HGNC:42863
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
2q12.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (108367116..108367940)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (108828019..108828843)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (108983572..108984396)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene sulfotransferase family, cytosolic, 1C, member 2 pseudogene 2 Neighboring gene sulfotransferase family 1C member 5, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16341 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr2:108980844-108982043 Neighboring gene sulfotransferase family 1C member 4 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr2:109019914-109020414 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr2:109020415-109020915 Neighboring gene small integral membrane protein 12 pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • germ cell-less homolog 1 pseudogene 2
  • germ cell-less, spermatogenesis associated 1 pseudogene 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_023717.1 

    Range
    101..925
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    108367116..108367940
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    108828019..108828843
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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