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PRXL2AP1 peroxiredoxin like 2A pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 100420900, updated on 10-Oct-2023

Summary

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Official Symbol
PRXL2AP1provided by HGNC
Official Full Name
peroxiredoxin like 2A pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:52407
See related
Ensembl:ENSG00000257220 AllianceGenome:HGNC:52407
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
FAM213AP1
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Genomic context

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See PRXL2AP1 in Genome Data Viewer
Location:
12q21.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (78130333..78130995, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (78108700..78109362, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (78524113..78524775, complement)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:77631785-77632286 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:77633489-77633990 Neighboring gene long intergenic non-protein coding RNA 2464 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4678 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr12:77741435-77742634 Neighboring gene uncharacterized LOC124902972 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr12:78038694-78039502 Neighboring gene NANOG hESC enhancer GRCh37_chr12:78039827-78040389 Neighboring gene Sharpr-MPRA regulatory region 9790 Neighboring gene Sharpr-MPRA regulatory region 15641 Neighboring gene neuron navigator 3 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr12:78282205-78283404 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr12:78333298-78334497 Neighboring gene NANOG hESC enhancer GRCh37_chr12:78375957-78376518 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:78495967-78496468 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:78496469-78496968 Neighboring gene uncharacterized LOC105369859 Neighboring gene long intergenic non-protein coding RNA 2424 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4679 Neighboring gene mitochondrial ribosomal protein L11 pseudogene 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • family with sequence similarity 213 member A pseudogene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_024032.1 

    Range
    101..763
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    78130333..78130995 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    78108700..78109362 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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