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NPAP1P3 nuclear pore associated protein 1 pseudogene 3 [ Homo sapiens (human) ]

Gene ID: 100420830, updated on 10-Oct-2023

Summary

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Official Symbol
NPAP1P3provided by HGNC
Official Full Name
nuclear pore associated protein 1 pseudogene 3provided by HGNC
Primary source
HGNC:HGNC:45020
See related
AllianceGenome:HGNC:45020
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
10q23.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (87377573..87378448)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (88261180..88262055)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (89137330..89138205)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene NUTM2A antisense RNA 1 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:89102067-89102674 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2581 Neighboring gene long intergenic non-protein coding RNA 863 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:89114408-89114914 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:89114915-89115421 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:89119641-89120142 Neighboring gene NUT family member 2D Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:89142841-89143342 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:89150255-89151229 Neighboring gene cathepsin L pseudogene 1 Neighboring gene family with sequence similarity 245 member A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_025530.1 

    Range
    101..976
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    87377573..87378448
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    88261180..88262055
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases