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PABPN1P1 PABPN1 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 100420758, updated on 10-Oct-2023

Summary

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Official Symbol
PABPN1P1provided by HGNC
Official Full Name
PABPN1 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:54988
See related
AllianceGenome:HGNC:54988
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See PABPN1P1 in Genome Data Viewer
Location:
Xq13.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (71419229..71420649, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (69853330..69854750, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (70639079..70640499, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene ZCRB1 pseudogene 1 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chrX:70560484-70561404 Neighboring gene uncharacterized LOC124905198 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:70584971-70585540 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29742 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20897 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29743 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:70586817-70587512 Neighboring gene RHOG family member 2, pseudogene Neighboring gene TATA-box binding protein associated factor 1 Neighboring gene uncharacterized LOC124905281 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chrX:70671287-70672283 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:70672284-70673279 Neighboring gene inhibitor of growth family, X-linked (pseudogene)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • PABII pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_026717.4 

    Range
    105..1525
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    71419229..71420649 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    69853330..69854750 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases