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TPST2P1 tyrosylprotein sulfotransferase 2 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 100420710, updated on 10-Oct-2023

Summary

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Official Symbol
TPST2P1provided by HGNC
Official Full Name
tyrosylprotein sulfotransferase 2 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:44425
See related
Ensembl:ENSG00000260582 AllianceGenome:HGNC:44425
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
15q14
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (36626677..36627776, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (34432181..34433280, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (36918878..36919977, complement)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene CDAN1 interacting nuclease 1 Neighboring gene tropomyosin 3 pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:36919333-36919834 Neighboring gene LARP4 pseudogene Neighboring gene Sharpr-MPRA regulatory region 1254 Neighboring gene uncharacterized LOC124903466 Neighboring gene VISTA enhancer hs828 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr15:37045234-37045802 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9194 Neighboring gene casein kinase 1 alpha 1 pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_025297.1 

    Range
    101..1200
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    36626677..36627776 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    34432181..34433280 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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