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BECN1P2 beclin 1 pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 100420149, updated on 10-Oct-2023

Summary

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Official Symbol
BECN1P2provided by HGNC
Official Full Name
beclin 1 pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:51330
See related
AllianceGenome:HGNC:51330
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
6q13
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (71075261..71076315)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (72255700..72256754)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (71784964..71786018)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene beta-1,3-glucuronyltransferase 2 Neighboring gene uncharacterized LOC105377850 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17324 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:71666023-71666538 Neighboring gene uncharacterized LOC124901229 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:71708165-71708862 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:71719574-71720074 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr6:71737398-71738597 Neighboring gene small nucleolar RNA U3 Neighboring gene LYPLA1 pseudogene 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • beclin 1, autophagy related pseudogene
  • beclin 1, autophagy related, pseudogene 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_025950.1 

    Range
    101..1155
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    71075261..71076315
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    72255700..72256754
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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