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APONP apolipoprotein N, pseudogene [ Homo sapiens (human) ]

Gene ID: 100419033, updated on 10-Oct-2023

Summary

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Official Symbol
APONPprovided by HGNC
Official Full Name
apolipoprotein N, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:53942
See related
AllianceGenome:HGNC:53942
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See APONP in Genome Data Viewer
Location:
12q13.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (56376748..56377450, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (56344436..56345138, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (56770532..56771234, complement)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene signal transducer and activator of transcription 2 Neighboring gene RNA, U7 small nuclear 40 pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6493 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6494 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6495 Neighboring gene apolipoprotein F Neighboring gene TBCC domain containing 1 pseudogene Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr12:56795121-56795653 Neighboring gene timeless circadian regulator Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr12:56817170-56818369 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr12:56837017-56837650 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:56842091-56842611 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6496 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6497

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of a novel apolipoprotein, ApoN, in ovarian follicular fluid. O'Bryan MK, et al. Endocrinology, 2004 Nov. PMID 15256496

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • apolipoprotein F pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_024021.1 

    Range
    101..803
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    56376748..56377450 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    56344436..56345138 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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