U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TAGLN2P1 transgelin 2 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 100418887, updated on 10-Oct-2023

Summary

Go to the top of the page Help
Official Symbol
TAGLN2P1provided by HGNC
Official Full Name
transgelin 2 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:21739
See related
AllianceGenome:HGNC:21739
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See TAGLN2P1 in Genome Data Viewer
Location:
8q23.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (106697227..106698095, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (107825347..107826215, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (107709455..107710323, complement)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene solute carrier family 16 member 14 pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19463 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19464 Neighboring gene oxidation resistance 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27799 Neighboring gene OXR1 antisense RNA 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27800 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19466 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19465 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27801 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:107672614-107673114 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:107673115-107673615 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:107676087-107676587 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27802 Neighboring gene MPRA-validated peak7139 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27803 Neighboring gene RNA, U7 small nuclear 84 pseudogene Neighboring gene actin binding Rho activating protein

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

Go to the top of the page Help

Markers

Other Names

  • transgelin 3 pseudogene

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_026067.2 

    Range
    101..969
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    106697227..106698095 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    107825347..107826215 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials