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Gm18728 predicted gene, 18728 [ Mus musculus (house mouse) ]

Gene ID: 100417638, updated on 8-Feb-2024

Summary

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Official Symbol
Gm18728provided by MGI
Official Full Name
predicted gene, 18728provided by MGI
Gene description
contactin associated protein-like 5A pseudogene
Primary source
MGI:MGI:5010913
See related
AllianceGenome:MGI:5010913
Gene type
pseudo
RefSeq status
INFERRED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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Genomic context

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Location:
1 E1.2; 1 49.26 cM
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (102899314..103328800)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (102971589..103401075)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_01813 Neighboring gene predicted gene 53054 Neighboring gene LYR motif-containing protein 2 pseudogene Neighboring gene STARR-positive B cell enhancer mm9_chr1:104524694-104524995 Neighboring gene STARR-seq mESC enhancer starr_01814 Neighboring gene STARR-seq mESC enhancer starr_01815 Neighboring gene STARR-seq mESC enhancer starr_01816 Neighboring gene STARR-seq mESC enhancer starr_01817 Neighboring gene predicted gene, 22034 Neighboring gene STARR-seq mESC enhancer starr_01818 Neighboring gene STARR-seq mESC enhancer starr_01819 Neighboring gene predicted gene, 23965 Neighboring gene STARR-seq mESC enhancer starr_01820 Neighboring gene STARR-seq mESC enhancer starr_01821 Neighboring gene STARR-seq mESC enhancer starr_01822 Neighboring gene STARR-seq mESC enhancer starr_01823 Neighboring gene STARR-seq mESC enhancer starr_01825 Neighboring gene STARR-seq mESC enhancer starr_01826 Neighboring gene STARR-seq mESC enhancer starr_01828 Neighboring gene predicted gene, 41924 Neighboring gene crumbs homolog 1 pseudogene Neighboring gene phosphatidylinositol transfer protein, cytoplasmic 1 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Other Names

  • contactin associated protein-like 5A pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_018622.4 

    Range
    101..429587
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    102899314..103328800
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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