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Hmgb1-ps6 high mobility group box 1, pseudogene 6 [ Mus musculus (house mouse) ]

Gene ID: 100416952, updated on 8-Feb-2024

Summary

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Official Symbol
Hmgb1-ps6provided by MGI
Official Full Name
high mobility group box 1, pseudogene 6provided by MGI
Primary source
MGI:MGI:3776507
See related
Ensembl:ENSMUSG00000080928 AllianceGenome:MGI:3776507
Gene type
pseudo
RefSeq status
INFERRED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Hmg-F; Gm15695; Hmg1-rs7; Hmg-1RI-A; Hmgb1-rs7
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Genomic context

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Location:
16 B2; 16 22.4 cM
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (31810071..31810684, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (31991253..31991866, complement)

Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene nuclear cap binding protein subunit 2 Neighboring gene SUMO/sentrin specific peptidase 5 Neighboring gene NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7 (B14.5a), pseudogene Neighboring gene STARR-seq mESC enhancer starr_40638 Neighboring gene p21 (RAC1) activated kinase 2 Neighboring gene predicted gene, 26419 Neighboring gene STARR-positive B cell enhancer ABC_E7439 Neighboring gene STARR-positive B cell enhancer ABC_E4164 Neighboring gene phosphatidylinositol glycan anchor biosynthesis, class X

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sensitivity to the locomotor stimulant effects of ethanol and allopregnanolone is influenced by common genes. Palmer AA, et al. Behav Neurosci, 2002 Feb. PMID 11895174
  2. Nitrous oxide antinociception in BXD recombinant inbred mouse strains and identification of quantitative trait loci. Quock RM, et al. Brain Res, 1996 Jun 24. PMID 8828582
  3. Recent integrations of mammalian Hmg retropseudogenes. Tecle E, et al. J Genet, 2006 Dec. PMID 17406091
  4. Molecular cloning, expression analysis, and chromosomal localization of mouse Hmg1-containing sequences. Pauken CM, et al. Mamm Genome, 1994 Feb. PMID 8180479

GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • high mobility group box 1, related sequence 7
  • high mobility group box 2 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_017707.1 

    Range
    101..714
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000082.7 Reference GRCm39 C57BL/6J

    Range
    31810071..31810684 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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