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Wdr46-ps Wdr46 retrotransposed pseudogene [ Mus musculus (house mouse) ]

Gene ID: 100416160, updated on 8-Feb-2024

Summary

Official Symbol
Wdr46-psprovided by MGI
Official Full Name
Wdr46 retrotransposed pseudogeneprovided by MGI
Primary source
MGI:MGI:5010132
See related
Ensembl:ENSMUSG00000105893 AllianceGenome:MGI:5010132
Gene type
pseudo
RefSeq status
INFERRED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm17947
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Genomic context

Location:
5 A1; 5 2.27 cM
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (4039005..4040705)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (3989005..3990705)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_12320 Neighboring gene mitochondrial transcription termination factor 1a Neighboring gene Rps4x retrotransposed pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E1296 Neighboring gene STARR-seq mESC enhancer starr_12321 Neighboring gene predicted gene, 51438 Neighboring gene A kinase anchor protein 9 Neighboring gene predicted gene, 40260 Neighboring gene STARR-positive B cell enhancer ABC_E2737 Neighboring gene cytochrome P450, family 51

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_018680.1 

    Range
    101..1801
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    4039005..4040705
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)