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RNY4P18 RNY4 pseudogene 18 [ Homo sapiens (human) ]

Gene ID: 100379298, updated on 10-Oct-2023

Summary

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Official Symbol
RNY4P18provided by HGNC
Official Full Name
RNY4 pseudogene 18provided by HGNC
Primary source
HGNC:HGNC:34068
See related
Ensembl:ENSG00000212409 AllianceGenome:HGNC:34068
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
9q31.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (111097327..111097413, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (123268989..123269075, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (113859607..113859693, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene lysophosphatidic acid receptor 1 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_105435 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_105449 Neighboring gene RNA, U6 small nuclear 432, pseudogene Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_105469 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28789 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28790 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28791 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20175 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:113715081-113715580 Neighboring gene uncharacterized LOC124902248 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20176 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28792 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:113861264-113862248 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_105528 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_105563 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_105573 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_105610 Neighboring gene VISTA enhancer hs1447 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_105661 Neighboring gene uncharacterized LOC105376219 Neighboring gene microRNA 7702

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • RNA, Ro-associated Y4 pseudogene 18

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_016630.1 

    Range
    101..187
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    111097327..111097413 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    123268989..123269075 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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