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Vmn1r86 vomeronasal 1 receptor 86 [ Mus musculus (house mouse) ]

Gene ID: 100312473, updated on 8-Feb-2024

Summary

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Official Symbol
Vmn1r86provided by MGI
Official Full Name
vomeronasal 1 receptor 86provided by MGI
Primary source
MGI:MGI:4438438
See related
Ensembl:ENSMUSG00000070816 AllianceGenome:MGI:4438438
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm10301
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Genomic context

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Location:
7 A1; 7 7.76 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (12835924..12836874, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (13101997..13102947, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene vomeronasal 1 receptor 85 Neighboring gene predicted gene 4270 Neighboring gene STARR-seq mESC enhancer starr_18070 Neighboring gene vomeronasal 1 receptor 87 Neighboring gene suppression of tumorigenicity 13 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual annotation and analysis of the defensin gene cluster in the C57BL/6J mouse reference genome. Amid C, et al. BMC Genomics, 2009 Dec 15. PMID 20003482, Free PMC Article
  2. Extreme variability among mammalian V1R gene families. Young JM, et al. Genome Res, 2010 Jan. PMID 19952141, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
vomeronasal 1 receptor 86
Names
vomeronasal 1 receptor Vmn1r86

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001167536.1 → NP_001161008.1  vomeronasal 1 receptor 86

    Status: PROVISIONAL

    Source sequence(s)
    AC121301
    Consensus CDS
    CCDS52025.1
    UniProtKB/TrEMBL
    L7N213, Q8VIB9
    Related
    ENSMUSP00000092423.3, ENSMUST00000094828.3
    Conserved Domains (1) summary
    pfam03402
    Location:42 → 301
    V1R; Vomeronasal organ pheromone receptor family, V1R

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    12835924..12836874 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

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