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AF357399 snoRNA AF357399 [ Mus musculus (house mouse) ]

Gene ID: 100302567, updated on 8-Feb-2024

Summary

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Official Symbol
AF357399provided by MGI
Official Full Name
snoRNA AF357399provided by MGI
Primary source
MGI:MGI:5439844
See related
AllianceGenome:MGI:5439844
Gene type
snoRNA
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
MBI-142
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Genomic context

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Location:
7; 7 A3
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (28050965..28051058)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (28351540..28351633)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E6527 Neighboring gene translocase of inner mitochondrial membrane 50 Neighboring gene predicted gene, 51445 Neighboring gene suppressor of Ty 5, DSIF elongation factor subunit Neighboring gene STARR-seq mESC enhancer starr_18409 Neighboring gene STARR-positive B cell enhancer ABC_E3708 Neighboring gene ribosomal protein S16 Neighboring gene pleckstrin homology domain containing, family G (with RhoGef domain) member 2 Neighboring gene STARR-positive B cell enhancer ABC_E445 Neighboring gene STARR-positive B cell enhancer ABC_E1728 Neighboring gene STARR-seq mESC enhancer starr_18413 Neighboring gene nuclear encoded tRNA isoleucine 16 (anticodon TAT) Neighboring gene STARR-positive B cell enhancer ABC_E2821 Neighboring gene Paf1, RNA polymerase II complex component Neighboring gene zinc finger protein 36

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse. Hüttenhofer A, et al. EMBO J, 2001 Jun 1. PMID 11387227, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • snoRNA MBI-142

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_028129.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AF357399

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    28050965..28051058
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases