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RASAL2-AS1 RASAL2 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100302401, updated on 10-Oct-2023

Summary

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Official Symbol
RASAL2-AS1provided by HGNC
Official Full Name
RASAL2 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:44170
See related
Ensembl:ENSG00000224687 AllianceGenome:HGNC:44170
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
1q25.2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (178091508..178093993, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (177446194..177448679, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (178060643..178063128, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene CRYZL2P-SEC16B readthrough Neighboring gene MPRA-validated peak475 silencer Neighboring gene crystallin zeta like 2, pseudogene Neighboring gene ReSE screen-validated silencer GRCh37_chr1:178019054-178019211 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2141 Neighboring gene uncharacterized LOC124904459 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:178062715-178063216 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1575 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1576 Neighboring gene uncharacterized LOC105371630 Neighboring gene RAS protein activator like 2 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr1:178253081-178253888 Neighboring gene Sharpr-MPRA regulatory region 3505 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:178289668-178290263 Neighboring gene uncharacterized LOC105371629

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

General gene information

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Other Names

  • RASAL2 antisense RNA 1 (non-protein coding)

Clone Names

  • FLJ42473

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027982.1 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    AL160281, BC027927
    Related
    ENST00000421505.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    178091508..178093993 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    177446194..177448679 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Chemical Information
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Research Materials