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LTV1P1 LTV1 ribosome biogenesis factor pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 100289220, updated on 10-Oct-2023

Summary

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Official Symbol
LTV1P1provided by HGNC
Official Full Name
LTV1 ribosome biogenesis factor pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:44049
See related
Ensembl:ENSG00000250219 AllianceGenome:HGNC:44049
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
4q27
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (120091049..120092261, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (123395149..123396361, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (121012204..121013416, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124900770 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21858 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:120987074-120987580 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:120987581-120988086 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21860 Neighboring gene MAD2L1 divergent transcript Neighboring gene mitotic arrest deficient 2 like 1 Neighboring gene ReSE screen-validated silencer GRCh37_chr4:121118839-121118995 Neighboring gene secretion associated Ras related GTPase 1A pseudogene 3 Neighboring gene uncharacterized LOC124900771

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • LTV1 homolog pseudogene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_022033.1 

    Range
    101..1313
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    120091049..120092261 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    123395149..123396361 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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