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WHAMMP4 WHAMM pseudogene 4 [ Homo sapiens (human) ]

Gene ID: 100288203, updated on 10-Oct-2023

Summary

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Official Symbol
WHAMMP4provided by HGNC
Official Full Name
WHAMM pseudogene 4provided by HGNC
Primary source
HGNC:HGNC:55700
See related
AllianceGenome:HGNC:55700
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
15q13.2
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (30471169..30490313)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (28264425..28283546)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (30763372..30782516)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101927788 Neighboring gene golgin A8 family member R Neighboring gene 15q13.2 beta inversion proximal recombination region Neighboring gene uncharacterized LOC100288482 Neighboring gene uncharacterized LOC105376704 Neighboring gene MPHOSPH10 pseudogene 3 Neighboring gene golgin subfamily A member 6-like protein 1 Neighboring gene 15q13.2 beta inversion distal recombination region Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:30852659-30853158 Neighboring gene golgin A8 family member Q Neighboring gene RNA, 7SL, cytoplasmic 796, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

General gene information

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Other Names

  • WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene
  • WASP homolog associated with actin, golgi membranes and microtubules pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_146103.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC019322, AC127502

  2. NR_146104.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC019322, AC127502

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    30471169..30490313
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_011332701.1 Reference GRCh38.p14 PATCHES

    Range
    2648432..2667594 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    28264425..28283546
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_022123.2: Suppressed sequence

    Description
    NG_022123.2: This RefSeq was removed because it is now thought that this locus is transcribed.
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases