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ANKRD11P1 ANKRD11 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 100287912, updated on 10-Oct-2023

Summary

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Official Symbol
ANKRD11P1provided by HGNC
Official Full Name
ANKRD11 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:54737
See related
Ensembl:ENSG00000234429 AllianceGenome:HGNC:54737
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
2p12
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (81194139..81201179, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (81194589..81201629, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (81421263..81428303, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene catenin alpha 2 Neighboring gene uncharacterized LOC105374824 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:80591811-80592596 Neighboring gene NANOG hESC enhancer GRCh37_chr2:80592898-80593415 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:80688730-80689234 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr2:80689235-80689740 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:80709895-80710095 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11685 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16095 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16096 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16097 Neighboring gene NANOG hESC enhancer GRCh37_chr2:81005685-81006186 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr2:81101296-81102149 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:81103634-81104173 Neighboring gene uncharacterized LOC105374827 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:81147049-81147550 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:81420933-81421434 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:81421435-81421934 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:81433285-81433784 Neighboring gene NANOG hESC enhancer GRCh37_chr2:81622884-81623398 Neighboring gene long intergenic non-protein coding RNA 1815 Neighboring gene CHMP4A pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • ankyrin repeat domain 11 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_021508.2 

    Range
    101..7141
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    81194139..81201179 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    81194589..81201629 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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