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MTCO1P51 MT-CO1 pseudogene 51 [ Homo sapiens (human) ]

Gene ID: 100287067, updated on 10-Oct-2023

Summary

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Official Symbol
MTCO1P51provided by HGNC
Official Full Name
MT-CO1 pseudogene 51provided by HGNC
Primary source
HGNC:HGNC:52116
See related
Ensembl:ENSG00000232981 AllianceGenome:HGNC:52116
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See MTCO1P51 in Genome Data Viewer
Location:
9q21.31
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (80563554..80564631, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (92721643..92722720, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (83178469..83179546, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 1507 Neighboring gene uncharacterized LOC105376099 Neighboring gene OCT4 hESC enhancer GRCh37_chr9:82664925-82665426 Neighboring gene VISTA enhancer hs1004 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:82757334-82758145 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:82771847-82772348 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:82852704-82853204 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:82853205-82853705 Neighboring gene uncharacterized LOC105376103 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:83015743-83016349 Neighboring gene nuclear pore associated protein 1 pseudogene 4 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:83236200-83236732 Neighboring gene MT-ND2 pseudogene 9 Neighboring gene NANOG hESC enhancer GRCh37_chr9:83279636-83280146 Neighboring gene ribosomal protein S19 pseudogene 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • mitochondrially encoded cytochrome c oxidase I pseudogene 51

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_032774.1 

    Range
    101..1178
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    80563554..80564631 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    92721643..92722720 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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