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GEMIN2P2 gem nuclear organelle associated protein 2 pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 100287063, updated on 10-Oct-2023

Summary

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Official Symbol
GEMIN2P2provided by HGNC
Official Full Name
gem nuclear organelle associated protein 2 pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:49562
See related
AllianceGenome:HGNC:49562
Gene type
pseudo
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See GEMIN2P2 in Genome Data Viewer
Location:
3p22.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (41977028..41978163)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (41994983..41996118)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene unc-51 like kinase 4 Neighboring gene uncharacterized LOC124900553 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:41967055-41967555 Neighboring gene MPRA-validated peak4618 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19726 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19727 Neighboring gene ReSE screen-validated silencer GRCh37_chr3:42040771-42040982 Neighboring gene ribosomal protein L36 pseudogene 20 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19728 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19729 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14242 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14241 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14240 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14239 Neighboring gene uncharacterized LOC107986077 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:42056327-42056828 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:42065830-42066748 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19730 Neighboring gene Sharpr-MPRA regulatory region 14156 Neighboring gene NANOG hESC enhancer GRCh37_chr3:42093014-42093515 Neighboring gene ribosomal protein L7a pseudogene 83 Neighboring gene trafficking kinesin protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome-wide association for abdominal subcutaneous and visceral adipose reveals a novel locus for visceral fat in women. Fox CS, et al. PLoS Genet, 2012. PMID 22589738, Free PMC Article
  2. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. Rose JE, et al. Mol Med, 2010 Jul-Aug. PMID 20379614, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Clinical trial of gene-disease association and gene-environment interaction. (HuGE Navigator)
    Title: Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.
Submit: New GeneRIF Correction

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh38)

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    41977028..41978163
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    41994983..41996118
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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