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RPL36AP35 ribosomal protein L36a pseudogene 35 [ Homo sapiens (human) ]

Gene ID: 100271610, updated on 10-Oct-2023

Summary

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Official Symbol
RPL36AP35provided by HGNC
Official Full Name
ribosomal protein L36a pseudogene 35provided by HGNC
Primary source
HGNC:HGNC:35639
See related
Ensembl:ENSG00000231810 AllianceGenome:HGNC:35639
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPL36A_16_1006
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Genomic context

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See RPL36AP35 in Genome Data Viewer
Location:
9q31.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (108821697..108822018)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (120990830..120991151)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (111583977..111584298)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105376214 Neighboring gene uncharacterized LOC105376212 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr9:111044856-111046055 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:111313529-111314030 Neighboring gene ReSE screen-validated silencer GRCh37_chr9:111324635-111324832 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28756 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr9:111396539-111397738 Neighboring gene NANOG hESC enhancer GRCh37_chr9:111425130-111425686 Neighboring gene ribosomal protein L36 pseudogene 14 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:111494497-111494997 Neighboring gene HNF4 motif-containing MPRA enhancer 53 Neighboring gene Sharpr-MPRA regulatory region 10106 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr9:111541867-111543066 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:111564123-111564676 Neighboring gene ATP synthase membrane subunit f pseudogene Neighboring gene actin like 7B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_011295.1 

    Range
    101..422
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    108821697..108822018
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    120990830..120991151
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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