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RPS26P45 ribosomal protein S26 pseudogene 45 [ Homo sapiens (human) ]

Gene ID: 100271570, updated on 10-Oct-2023

Summary

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Official Symbol
RPS26P45provided by HGNC
Official Full Name
ribosomal protein S26 pseudogene 45provided by HGNC
Primary source
HGNC:HGNC:36944
See related
Ensembl:ENSG00000241765 AllianceGenome:HGNC:36944
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPS26_17_1256
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Genomic context

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See RPS26P45 in Genome Data Viewer
Location:
12q15
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (69422677..69422995)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (69401633..69401951)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (69816457..69816775)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:69753267-69753870 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:69753871-69754472 Neighboring gene lysozyme Neighboring gene YEATS domain containing 4 Neighboring gene RNA, 7SL, cytoplasmic 804, pseudogene Neighboring gene Sharpr-MPRA regulatory regions 8384 and 8454 Neighboring gene long intergenic non-protein coding RNA 2373 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr12:69860555-69861168 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:69863839-69864340 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6651 Neighboring gene fibroblast growth factor receptor substrate 2 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6652 Neighboring gene small nucleolar RNA, H/ACA box 113

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_011087.1 

    Range
    101..419
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    69422677..69422995
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    69401633..69401951
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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