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RPL7AP56 ribosomal protein L7a pseudogene 56 [ Homo sapiens (human) ]

Gene ID: 100271536, updated on 10-Oct-2023

Summary

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Official Symbol
RPL7AP56provided by HGNC
Official Full Name
ribosomal protein L7a pseudogene 56provided by HGNC
Primary source
HGNC:HGNC:35585
See related
Ensembl:ENSG00000242834 AllianceGenome:HGNC:35585
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPL7A_21_1137
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Genomic context

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See RPL7AP56 in Genome Data Viewer
Location:
11p12
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (37725645..37726490)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (37869209..37870054)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (37747195..37748040)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107984326 Neighboring gene uncharacterized LOC105376631 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4635 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4636 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4637 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4638 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr11:36771874-36772444 Neighboring gene NANOG hESC enhancer GRCh37_chr11:37451937-37452438 Neighboring gene uncharacterized LOC105376632 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr11:37526125-37527324 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr11:37880455-37881030 Neighboring gene NANOG hESC enhancer GRCh37_chr11:37913389-37913890 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:37989075-37989576 Neighboring gene NANOG hESC enhancer GRCh37_chr11:37990791-37991343 Neighboring gene long intergenic non-protein coding RNA 2760 Neighboring gene NANOG hESC enhancer GRCh37_chr11:38070931-38071450 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr11:38132226-38133425 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr11:38134504-38135142 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr11:38173897-38174616 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr11:38190669-38191868 Neighboring gene uncharacterized LOC105376634 Neighboring gene DNAAF11 pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_010915.1 

    Range
    101..946
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    37725645..37726490
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    37869209..37870054
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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