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RPL21P109 ribosomal protein L21 pseudogene 109 [ Homo sapiens (human) ]

Gene ID: 100271437, updated on 10-Oct-2023

Summary

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Official Symbol
RPL21P109provided by HGNC
Official Full Name
ribosomal protein L21 pseudogene 109provided by HGNC
Primary source
HGNC:HGNC:36388
See related
Ensembl:ENSG00000237816 AllianceGenome:HGNC:36388
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPL21_49_1320
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Genomic context

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Location:
13q21.33
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (71704140..71704693)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (70929378..70929931)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (72278272..72278825)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene Rab9 effector protein with kelch motifs pseudogene 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:71964457-71964957 Neighboring gene dachshund family transcription factor 1 Neighboring gene Sharpr-MPRA regulatory region 6884 Neighboring gene VISTA enhancer hs137 Neighboring gene H3 histone pseudogene 36 Neighboring gene VISTA enhancer hs619 Neighboring gene VISTA enhancer hs188 Neighboring gene NANOG hESC enhancer GRCh37_chr13:72405848-72406453 Neighboring gene VISTA enhancer hs138 Neighboring gene ribosomal protein L35a pseudogene 31 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7811 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr13:72450848-72451348 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr13:72451349-72451849 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7812 Neighboring gene ribosomal protein S10 pseudogene 21

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_010414.1 

    Range
    101..654
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    71704140..71704693
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    70929378..70929931
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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