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RPS4XP20 ribosomal protein S4X pseudogene 20 [ Homo sapiens (human) ]

Gene ID: 100271386, updated on 10-Oct-2023

Summary

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Official Symbol
RPS4XP20provided by HGNC
Official Full Name
ribosomal protein S4X pseudogene 20provided by HGNC
Primary source
HGNC:HGNC:36437
See related
Ensembl:ENSG00000249987 AllianceGenome:HGNC:36437
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPS4P20; RPS4X_9_1648
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Genomic context

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See RPS4XP20 in Genome Data Viewer
Location:
19q13.11
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 19 NC_000019.10 (34022565..34023450, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 19 NC_060943.1 (36543372..36544257, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (34513470..34514355, complement)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105372371 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:34494413-34494914 Neighboring gene ribosomal protein S4X pseudogene 23 Neighboring gene ReSE screen-validated silencer GRCh37_chr19:34521753-34521905 Neighboring gene ribosomal protein S4X pseudogene 21 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_51262 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:34617551-34618060 Neighboring gene coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_010128.2 

    Range
    101..986
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p14 Primary Assembly

    Range
    34022565..34023450 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060943.1 Alternate T2T-CHM13v2.0

    Range
    36543372..36544257 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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