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RPS27AP5 ribosomal protein S27a pseudogene 5 [ Homo sapiens (human) ]

Gene ID: 100271374, updated on 10-Oct-2023

Summary

Official Symbol
RPS27AP5provided by HGNC
Official Full Name
ribosomal protein S27a pseudogene 5provided by HGNC
Primary source
HGNC:HGNC:36867
See related
Ensembl:ENSG00000231767 AllianceGenome:HGNC:36867
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPS27A_1_141
Summary
Predicted to enable protein tag and ubiquitin protein ligase binding activity. Predicted to be involved in modification-dependent protein catabolic process and protein ubiquitination. Predicted to be located in ribosome. Predicted to be active in cytoplasm and nucleus. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

Location:
1q31.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (192716135..192716683)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (192063215..192063763)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (192685265..192685813)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105371664 Neighboring gene uncharacterized LOC107985241 Neighboring gene regulator of G protein signaling 13 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:192637387-192637888 Neighboring gene HNF1 motif-containing MPRA enhancer 26 Neighboring gene microRNA 4426 Neighboring gene uncharacterized LOC105371665 Neighboring gene integrin subunit beta 1 binding protein 1 pseudogene

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_010047.2 

    Range
    101..649
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    192716135..192716683
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    192063215..192063763
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)