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RPS12P18 ribosomal protein S12 pseudogene 18 [ Homo sapiens (human) ]

Gene ID: 100271354, updated on 10-Oct-2023

Summary

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Official Symbol
RPS12P18provided by HGNC
Official Full Name
ribosomal protein S12 pseudogene 18provided by HGNC
Primary source
HGNC:HGNC:36421
See related
Ensembl:ENSG00000232965 AllianceGenome:HGNC:36421
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPS12P19; RPS12_8_1068; RPS12_9_1069
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Genomic context

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Location:
10q22.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (79544079..79544356)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (80413214..80413491)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (81303835..81304112)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC729815 Neighboring gene eukaryotic translation initiation factor 5A like 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:81283336-81283836 Neighboring gene ReSE screen-validated silencer GRCh37_chr10:81288830-81289000 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:81316545-81317045 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:81321844-81322357 Neighboring gene surfactant protein A2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:81343957-81344456 Neighboring gene mannose-binding lectin family member 3, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • ribosomal protein S12 pseudogene 19

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_011294.1 

    Range
    101..378
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    79544079..79544356
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    80413214..80413491
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases