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RPL35AP6 ribosomal protein L35a pseudogene 6 [ Homo sapiens (human) ]

Gene ID: 100271312, updated on 10-Oct-2023

Summary

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Official Symbol
RPL35AP6provided by HGNC
Official Full Name
ribosomal protein L35a pseudogene 6provided by HGNC
Primary source
HGNC:HGNC:36793
See related
Ensembl:ENSG00000228879 AllianceGenome:HGNC:36793
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPL35A_3_191
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Genomic context

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Location:
1q44
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (246755511..246755832, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (246181989..246182310, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (246918813..246919134, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene consortin, connexin sorting protein Neighboring gene suppressyn-like Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr1:246810364-246811563 Neighboring gene MPRA-validated peak817 silencer Neighboring gene uncharacterized LOC102724382 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:246853136-246853656 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2858 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2859 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2035 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2036 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2037 Neighboring gene MPRA-validated peak819 silencer Neighboring gene saccharopine dehydrogenase (putative) Neighboring gene ReSE screen-validated silencer GRCh37_chr1:246917324-246917474 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:246931623-246932281 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr1:246939407-246940606 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2860 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2038 Neighboring gene kinesin family member 28, pseudogene Neighboring gene long intergenic non-protein coding RNA 1341

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_011079.1 

    Range
    101..422
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    246755511..246755832 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    246181989..246182310 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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