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RPL27AP4 ribosomal protein L27a pseudogene 4 [ Homo sapiens (human) ]

Gene ID: 100271299, updated on 10-Oct-2023

Summary

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Official Symbol
RPL27AP4provided by HGNC
Official Full Name
ribosomal protein L27a pseudogene 4provided by HGNC
Primary source
HGNC:HGNC:36262
See related
Ensembl:ENSG00000233939 AllianceGenome:HGNC:36262
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPL27A_2_255
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Genomic context

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Location:
2q12.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (106304755..106305204)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (106765567..106766016)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (106921211..106921660)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene 2q12.2 recombination region Neighboring gene SRSF3 pseudogene 4 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11847 Neighboring gene Sharpr-MPRA regulatory region 2466 Neighboring gene ribosomal protein S21 pseudogene 2 Neighboring gene ILRUN pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16340 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11848 Neighboring gene ANAPC1 pseudogene 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_011006.1 

    Range
    101..550
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    106304755..106305204
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    106765567..106766016
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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