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RPL23AP22 ribosomal protein L23a pseudogene 22 [ Homo sapiens (human) ]

Gene ID: 100271291, updated on 10-Oct-2023

Summary

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Official Symbol
RPL23AP22provided by HGNC
Official Full Name
ribosomal protein L23a pseudogene 22provided by HGNC
Primary source
HGNC:HGNC:35505
See related
Ensembl:ENSG00000237213 AllianceGenome:HGNC:35505
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPL23A_2_142
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Genomic context

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Location:
1q31.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (193756814..193757277, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (193105776..193106239, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (193725944..193726407, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 1031 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr1:193324401-193325600 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2270 Neighboring gene uncharacterized LOC124904475 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2271 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2272 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:193538144-193538280 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr1:193583455-193584654 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:193692068-193692676 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:193692677-193693283 Neighboring gene uncharacterized LOC124904676 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr1:193710151-193710862 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_1434 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_1475 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_1503 Neighboring gene MPRA-validated peak609 silencer Neighboring gene uncharacterized LOC124904476 Neighboring gene uncharacterized LOC107985242 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr1:194143560-194144113 Neighboring gene MPRA-validated peak610 silencer Neighboring gene eukaryotic translation elongation factor 1 alpha 1 pseudogene 14

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_010963.2 

    Range
    101..564
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    193756814..193757277 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    193105776..193106239 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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