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RPS2P44 ribosomal protein S2 pseudogene 44 [ Homo sapiens (human) ]

Gene ID: 100271248, updated on 10-Oct-2023

Summary

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Official Symbol
RPS2P44provided by HGNC
Official Full Name
ribosomal protein S2 pseudogene 44provided by HGNC
Primary source
HGNC:HGNC:35811
See related
AllianceGenome:HGNC:35811
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPS2_21_1482
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Genomic context

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Location:
16q12.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (48577484..48578392, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (54375157..54376065, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (48611395..48612303, complement)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U13 Neighboring gene molybdenum cofactor synthesis 1 pseudogene 1 Neighboring gene ReSE screen-validated silencer GRCh37_chr16:48562077-48562253 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10795 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10796 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10797 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:48572485-48572984 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:48575532-48576032 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:48576033-48576533 Neighboring gene NEDD4 binding protein 1 Neighboring gene Sharpr-MPRA regulatory region 9701 Neighboring gene probable ribosome biogenesis protein RLP24 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10798 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7457 Neighboring gene uncharacterized LOC124903687 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10799 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10800

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_010753.2 

    Range
    101..1009
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    48577484..48578392 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060940.1 Alternate T2T-CHM13v2.0

    Range
    54375157..54376065 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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