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RPS20P24 ribosomal protein S20 pseudogene 24 [ Homo sapiens (human) ]

Gene ID: 100271232, updated on 10-Oct-2023

Summary

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Official Symbol
RPS20P24provided by HGNC
Official Full Name
ribosomal protein S20 pseudogene 24provided by HGNC
Primary source
HGNC:HGNC:36283
See related
AllianceGenome:HGNC:36283
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPS20_10_984
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Genomic context

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Location:
9q21.13
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (72655800..72656310, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (84806707..84807217, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (75270716..75271226, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101927234 Neighboring gene small nucleolar RNA U13 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28461 Neighboring gene H3K27ac hESC enhancer GRCh37_chr9:75166586-75167086 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr9:75172238-75173437 Neighboring gene uncharacterized LOC101927191 Neighboring gene transmembrane channel like 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28462 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr9:75295411-75296186 Neighboring gene ReSE screen-validated silencer GRCh37_chr9:75299935-75300148 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28463 Neighboring gene RPS27A pseudogene 15 Neighboring gene uncharacterized LOC124902181 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr9:75472952-75474151 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr9:75477204-75478403

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_010663.4 

    Range
    101..611
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    72655800..72656310 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    84806707..84807217 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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