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RPL21P42 ribosomal protein L21 pseudogene 42 [ Homo sapiens (human) ]

Gene ID: 100271162, updated on 10-Oct-2023

Summary

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Official Symbol
RPL21P42provided by HGNC
Official Full Name
ribosomal protein L21 pseudogene 42provided by HGNC
Primary source
HGNC:HGNC:37017
See related
Ensembl:ENSG00000240068 AllianceGenome:HGNC:37017
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPL21_13_421
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Genomic context

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See RPL21P42 in Genome Data Viewer
Location:
3q25.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (154023796..154024337)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (156794811..156795352)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (153741585..153742126)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2006 Neighboring gene long intergenic non-protein coding RNA 2877 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20718 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:153514677-153515178 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr3:153598703-153599902 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20719 Neighboring gene U8 small nucleolar RNA Neighboring gene ARHGEF26 antisense RNA 1 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_65370 Neighboring gene Rho guanine nucleotide exchange factor 26 Neighboring gene uncharacterized LOC105374167

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_010306.1 

    Range
    101..642
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    154023796..154024337
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    156794811..156795352
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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