U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

RPL21P40 ribosomal protein L21 pseudogene 40 [ Homo sapiens (human) ]

Gene ID: 100271158, updated on 10-Oct-2023

Summary

Go to the top of the page Help
Official Symbol
RPL21P40provided by HGNC
Official Full Name
ribosomal protein L21 pseudogene 40provided by HGNC
Primary source
HGNC:HGNC:36189
See related
Ensembl:ENSG00000235670 AllianceGenome:HGNC:36189
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPL21_10_356
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
3p22.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (32030154..32030711)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (32033116..32033673)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (32071646..32072203)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene oxysterol binding protein like 10 Neighboring gene zinc finger protein 587 pseudogene 1 Neighboring gene NANOG hESC enhancer GRCh37_chr3:31938297-31938798 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:31987818-31988420 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:31988421-31989022 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19631 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19632 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14164 Neighboring gene zinc finger protein 860 Neighboring gene small nucleolar RNA SNORA25 Neighboring gene NIFK pseudogene 7

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

Go to the top of the page Help

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_010284.1 

    Range
    101..658
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    32030154..32030711
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    32033116..32033673
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases