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RPS17P10 ribosomal protein S17 pseudogene 10 [ Homo sapiens (human) ]

Gene ID: 100271071, updated on 10-Oct-2023

Summary

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Official Symbol
RPS17P10provided by HGNC
Official Full Name
ribosomal protein S17 pseudogene 10provided by HGNC
Primary source
HGNC:HGNC:36438
See related
Ensembl:ENSG00000235110 AllianceGenome:HGNC:36438
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPS17_2_414
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Genomic context

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Location:
3q24
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (143855692..143856165, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (146602318..146602791, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (143574534..143575007, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene solute carrier family 9 member A9 Neighboring gene uncharacterized LOC102724120 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:143366803-143367304 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:143367305-143367804 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20657 Neighboring gene UBTD2 pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20658 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20659 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20660 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:143689971-143690551 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:143690552-143691132 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14800 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20663 Neighboring gene divergent protein kinase domain 2A Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20664 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20665 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:143856144-143856657 Neighboring gene RNA, 5S ribosomal pseudogene 144

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_011152.2 

    Range
    101..574
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    143855692..143856165 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    146602318..146602791 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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