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RPS8P6 ribosomal protein S8 pseudogene 6 [ Homo sapiens (human) ]

Gene ID: 100270871, updated on 10-Oct-2023

Summary

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Official Symbol
RPS8P6provided by HGNC
Official Full Name
ribosomal protein S8 pseudogene 6provided by HGNC
Primary source
HGNC:HGNC:36947
See related
Ensembl:ENSG00000231660 AllianceGenome:HGNC:36947
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPS8_1_339
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Genomic context

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Location:
3p26.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (308717..309319, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (300538..301140, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (350400..351002, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene CHL1 antisense RNA 2 Neighboring gene cell adhesion molecule L1 like Neighboring gene FOXA motif-containing MPRA enhancer 226 Neighboring gene RNA, U6 small nuclear 1194, pseudogene Neighboring gene CHL1 antisense RNA 1 Neighboring gene NANOG hESC enhancer GRCh37_chr3:492506-493034 Neighboring gene uncharacterized LOC105376922

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_010107.1 

    Range
    101..703
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    308717..309319 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    300538..301140 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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