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RPL7P18 ribosomal protein L7 pseudogene 18 [ Homo sapiens (human) ]

Gene ID: 100270852, updated on 10-Oct-2023

Summary

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Official Symbol
RPL7P18provided by HGNC
Official Full Name
ribosomal protein L7 pseudogene 18provided by HGNC
Primary source
HGNC:HGNC:36949
See related
Ensembl:ENSG00000243806 AllianceGenome:HGNC:36949
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPL7_7_596
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Genomic context

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Location:
5q15
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (94825890..94826715, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (95310260..95311085, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (94161595..94162420, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene KIAA0825 Neighboring gene FAST kinase domains 1 pseudogene Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:93953323-93954187 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22791 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22792 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:93968657-93969156 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22793 Neighboring gene SMC5-SMC6 complex localization factor 1 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr5:94128945-94130144 Neighboring gene multiple C2 and transmembrane domain containing 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22795 Neighboring gene ReSE screen-validated silencer GRCh37_chr5:94365679-94365868 Neighboring gene MPRA-validated peak5358 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22796 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22797 Neighboring gene uncharacterized LOC105379085 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16180 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16181 Neighboring gene uncharacterized LOC105379089

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_009976.2 

    Range
    101..926
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    94825890..94826715 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    95310260..95311085 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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