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RPL6P9 ribosomal protein L6 pseudogene 9 [ Homo sapiens (human) ]

Gene ID: 100270847, updated on 10-Oct-2023

Summary

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Official Symbol
RPL6P9provided by HGNC
Official Full Name
ribosomal protein L6 pseudogene 9provided by HGNC
Primary source
HGNC:HGNC:36484
See related
AllianceGenome:HGNC:36484
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPL6_6_412
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Genomic context

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Location:
3q23
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (142581289..142581978)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (145328558..145329247)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (142300131..142300820)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene EIF2AK1 pseudogene 1 Neighboring gene ATR serine/threonine kinase Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr3:142203676-142204875 Neighboring gene SUCLG2 pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20643 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20644 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20645 Neighboring gene RNA, 5S ribosomal pseudogene 143 Neighboring gene PLS1 antisense RNA 1 Neighboring gene plastin 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_011322.1 

    Range
    101..790
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    142581289..142581978
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    145328558..145329247
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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