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GAPDHP47 glyceraldehyde 3 phosphate dehydrogenase pseudogene 47 [ Homo sapiens (human) ]

Gene ID: 100240712, updated on 10-Oct-2023

Summary

Official Symbol
GAPDHP47provided by HGNC
Official Full Name
glyceraldehyde 3 phosphate dehydrogenase pseudogene 47provided by HGNC
Primary source
HGNC:HGNC:37803
See related
Ensembl:ENSG00000243033 AllianceGenome:HGNC:37803
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See GAPDHP47 in Genome Data Viewer
Location:
3q24
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (143503074..143504296, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (146249642..146250864, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (143221916..143223138, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:142947064-142947564 Neighboring gene PBX homeobox 2 pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20653 Neighboring gene solute carrier family 9 member A9 Neighboring gene SLC9A9 antisense RNA 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20654 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:143148743-143149263 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr3:143162319-143163518 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_64869 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:143236449-143236979 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20655 Neighboring gene ReSE screen-validated silencer GRCh37_chr3:143262071-143262249 Neighboring gene ST13, Hsp70 interacting protein pseudogene 15 Neighboring gene uncharacterized LOC124906294 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20656

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_009352.3 

    Range
    101..1323
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    143503074..143504296 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    146249642..146250864 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)