U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Snord1c small nucleolar RNA, C/D box 1C [ Mus musculus (house mouse) ]

Gene ID: 100216536, updated on 8-Feb-2024

Summary

Go to the top of the page Help
Official Symbol
Snord1cprovided by MGI
Official Full Name
small nucleolar RNA, C/D box 1Cprovided by MGI
Primary source
MGI:MGI:3819527
See related
Ensembl:ENSMUSG00000065640 AllianceGenome:MGI:3819527
Gene type
snoRNA
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Snord1c in Genome Data Viewer
Location:
11 E2; 11 81.49 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (116563331..116563408)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (116672505..116672582)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene arylalkylamine N-acetyltransferase Neighboring gene rhomboid 5 homolog 2 Neighboring gene STARR-seq mESC enhancer starr_31215 Neighboring gene STARR-seq mESC enhancer starr_31216 Neighboring gene cytoglobin Neighboring gene photoreceptor disc component Neighboring gene STARR-positive B cell enhancer ABC_E471 Neighboring gene small nucleolar RNA host gene 16 Neighboring gene small nucleolar RNA, C/D box 1B Neighboring gene small nucleolar RNA, C/D box 1A

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Identification of a novel box C/D snoRNA from mouse nucleolar cDNA library. Zhou H, et al. Gene, 2004 Feb 18. PMID 14960365

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Other Names

  • R38c snoRNA

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_028569.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AJ543402
    Related
    ENSMUST00000083706.3

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    116563331..116563408
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Chemical Information
Molecular Biology Databases