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RNY5P7 RNY5 pseudogene 7 [ Homo sapiens (human) ]

Gene ID: 100169835, updated on 10-Oct-2023

Summary

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Official Symbol
RNY5P7provided by HGNC
Official Full Name
RNY5 pseudogene 7provided by HGNC
Primary source
HGNC:HGNC:34088
See related
AllianceGenome:HGNC:34088
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RNY5P7 in Genome Data Viewer
Location:
10q24.31
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (101166209..101166283)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (102049566..102049640)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (102925966..102926040)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:102821610-102822498 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2718 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr10:102829506-102830705 Neighboring gene Kazal type serine peptidase inhibitor domain 1 Neighboring gene Sharpr-MPRA regulatory region 9711 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3907 Neighboring gene TLX1 neighbor Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:102880827-102881554 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:102902239-102903043 Neighboring gene T cell leukemia homeobox 1 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr10:102942541-102943162 Neighboring gene long intergenic non-protein coding RNA 1514 Neighboring gene SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 7 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:102950066-102950672 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3908 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3909 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2719 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:102976445-102977036 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:102977629-102978220 Neighboring gene uncharacterized LOC124902491 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:102982447-102983096

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • RNA, Ro-associated Y5 pseudogene 7

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_007998.1 

    Range
    101..175
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    101166209..101166283
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    102049566..102049640
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases