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RNU7-13P RNA, U7 small nuclear 13 pseudogene [ Homo sapiens (human) ]

Gene ID: 100147761, updated on 10-Oct-2023

Summary

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Official Symbol
RNU7-13Pprovided by HGNC
Official Full Name
RNA, U7 small nuclear 13 pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:34109
See related
Ensembl:ENSG00000252222 AllianceGenome:HGNC:34109
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
U7.13
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Genomic context

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Location:
1q25.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (184821430..184821489, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (184184637..184184696, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (184790564..184790623, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene ER degradation enhancing alpha-mannosidase like protein 3 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2237 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2238 Neighboring gene uncharacterized LOC105371649 Neighboring gene uncharacterized LOC107985238 Neighboring gene niban apoptosis regulator 1 Neighboring gene MPRA-validated peak504 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1640 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:184815021-184815626 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2239 Neighboring gene uncharacterized LOC124904469 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2240 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1641 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1642 Neighboring gene Sharpr-MPRA regulatory region 9576 Neighboring gene long intergenic non-protein coding RNA 1633

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. U7 snRNAs: a computational survey. Marz M, et al. Genomics Proteomics Bioinformatics, 2007 Dec. PMID 18267300, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • RNA, small nuclear U7.13 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_007600.1 

    Range
    101..160
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    184821430..184821489 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    184184637..184184696 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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