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RNU7-12P RNA, U7 small nuclear 12 pseudogene [ Homo sapiens (human) ]

Gene ID: 100147760, updated on 10-Oct-2023

Summary

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Official Symbol
RNU7-12Pprovided by HGNC
Official Full Name
RNA, U7 small nuclear 12 pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:34108
See related
Ensembl:ENSG00000251839 AllianceGenome:HGNC:34108
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
U7.12; RNU7-100P
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Genomic context

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Location:
10p12.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (27232259..27232316, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (27262281..27262338, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (27521188..27521245, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3180 Neighboring gene ReSE screen-validated silencer GRCh37_chr10:27444170-27444368 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3181 Neighboring gene microtubule associated serine/threonine kinase like Neighboring gene acyl-CoA binding domain containing 5 Neighboring gene RNA, U2 small nuclear 24, pseudogene Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:27528778-27529280 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2245 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3182 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3183 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3184 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3185 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3186 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2246 Neighboring gene leucine rich repeat containing 37 member A6, pseudogene Neighboring gene outer dynein arm docking complex subunit 2 pseudogene 1 Neighboring gene uncharacterized LOC102724245

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. U7 snRNAs: a computational survey. Marz M, et al. Genomics Proteomics Bioinformatics, 2007 Dec. PMID 18267300, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • RNA, U7 small nuclear 100 pseudogene
  • RNA, small nuclear U7.12 pseudogene

Clone Names

  • FLJ10376

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_007599.5 

    Range
    101..158
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    27232259..27232316 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    27262281..27262338 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases