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GTF3AP6 general transcription factor IIIA pseudogene 6 [ Homo sapiens (human) ]

Gene ID: 100135063, updated on 10-Oct-2023

Summary

Official Symbol
GTF3AP6provided by HGNC
Official Full Name
general transcription factor IIIA pseudogene 6provided by HGNC
Primary source
HGNC:HGNC:49749
See related
AllianceGenome:HGNC:49749
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

Location:
7q31.31
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (118880421..118881262, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (120195798..120196639, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (118520475..118521316, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107986747 Neighboring gene uncharacterized LOC105375473 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:118267122-118267622 Neighboring gene MPRA-validated peak6701 silencer Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:118585368-118585868 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:118585869-118586369 Neighboring gene MPRA-validated peak6703 silencer Neighboring gene eukaryotic translation initiation factor 3 subunit I pseudogene Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr7:118740781-118741369 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:118850550-118851050 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:118851051-118851551 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:118947178-118947344 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:119067491-119067992 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:119067993-119068492 Neighboring gene uncharacterized LOC124901816

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_007340.4 

    Range
    101..942
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    118880421..118881262 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    120195798..120196639 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)