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GYG1P1 glycogenin 1 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 100132965, updated on 10-Oct-2023

Summary

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Official Symbol
GYG1P1provided by HGNC
Official Full Name
glycogenin 1 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:39712
See related
Ensembl:ENSG00000251633 AllianceGenome:HGNC:39712
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
8q21.11
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (73904599..73915106, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (74333841..74344348, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (74816834..74827341, complement)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene ubiquitin conjugating enzyme E2 W Neighboring gene RNA, 7SL, cytoplasmic 760, pseudogene Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:74756087-74756814 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27533 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:74785489-74785988 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27534 Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:74790306-74791183 Neighboring gene long intergenic non-protein coding RNA 1617 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27535 Neighboring gene elongin C Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:74882747-74883636 Neighboring gene H3K27ac-H3K4me1 hESC enhancers GRCh37_chr8:74883637-74884525 and GRCh37_chr8:74884526-74885414 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19296 Neighboring gene ReSE screen-validated silencer GRCh37_chr8:74888348-74888563 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19297 Neighboring gene ribosomal protein S20 pseudogene 21 Neighboring gene transmembrane protein 70

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • glycogenin 1 pseudogene 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_021230.2 

    Range
    101..10608
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    73904599..73915106 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    74333841..74344348 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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