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GOLGA6L25 golgin A6 family like 25 [ Homo sapiens (human) ]

Gene ID: 100132202, updated on 10-Oct-2023

Summary

Official Symbol
GOLGA6L25provided by HGNC
Official Full Name
golgin A6 family like 25provided by HGNC
Primary source
HGNC:HGNC:55711
See related
Ensembl:ENSG00000227717
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
GOLGA6L25P
Expression
Restricted expression toward testis (RPKM 11.7) See more
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Genomic context

Location:
15q13.1
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (28553568..28563779)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (26330280..26340490)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (28798714..28808925)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene golgin A8 family member G Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:28777697-28778196 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:28790612-28791114 Neighboring gene MPHOSPH10 pseudogene 8 Neighboring gene pectinesterase inhibitor 10-like Neighboring gene HERC2 pseudogene 11

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General protein information

Preferred Names
golgin subfamily A member 6-like protein 25
Names
golgin A6 family like 25, pseudogene
golgin subfamily A member 6-like protein 22

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001365373.2NP_001352302.2  golgin subfamily A member 6-like protein 25

    Status: VALIDATED

    Source sequence(s)
    AC138749
    Consensus CDS
    CCDS91968.1
    UniProtKB/Swiss-Prot
    P0DX01
    UniProtKB/TrEMBL
    A0A087X1J6
    Related
    ENSP00000484257.2, ENST00000620691.5
    Conserved Domains (1) summary
    PTZ00121
    Location:158762
    PTZ00121; MAEBL; Provisional

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    28553568..28563779
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_011332701.1 Reference GRCh38.p14 PATCHES

    Range
    715573..725784
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    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_1

Genomic

  1. NW_003315943.1 Reference GRCh38.p14 ALT_REF_LOCI_1

    Range
    253148..263359
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_2

Genomic

  1. NT_187660.1 Reference GRCh38.p14 ALT_REF_LOCI_2

    Range
    829359..839570
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    26330280..26340490
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)