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RPS29P10 ribosomal protein S29 pseudogene 10 [ Homo sapiens (human) ]

Gene ID: 100132037, updated on 10-Oct-2023

Summary

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Official Symbol
RPS29P10provided by HGNC
Official Full Name
ribosomal protein S29 pseudogene 10provided by HGNC
Primary source
HGNC:HGNC:37006
See related
Ensembl:ENSG00000226884 AllianceGenome:HGNC:37006
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPS29_1_224
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Genomic context

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Location:
2p15
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (61589493..61589663, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (61595536..61595706, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (61816628..61816798, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene MPRA-validated peak3716 silencer Neighboring gene USP34 divergent transcript Neighboring gene exportin 1 Neighboring gene MPRA-validated peak3717 silencer Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:61743599-61744099 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15831 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15832 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15833 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:61766044-61766833 Neighboring gene proteasome 26S subunit, non-ATPase 12 pseudogene Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr2:61809253-61809844 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:61823834-61824398 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr2:61824963-61825528 Neighboring gene RNA, U6 small nuclear 1145, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15834 Neighboring gene MPRA-validated peak3721 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15835 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11531 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:61922999-61923614 Neighboring gene ribosomal protein L14 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_011022.1 

    Range
    101..271
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    61589493..61589663 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    61595536..61595706 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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